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I just met Sandra Day O’Connor

She is cool.

httpv://www.youtube.com/watch?v=VcnulpfQTcg

I am too drained to write anything original

httpv://www.youtube.com/watch?v=wVcqyB2Rbz8

The spatial theory of disease:

In his under-appreciated novel Super-Cannes, easily amongst his best, J.G. Ballard explored the psychological, sexual, and even epidemiological implications of landscape design. This is “the secret life of the business park,” Ballard writes.

At one point the book’s narrator is speaking with the corporate director of Eden-Olympia, a planned live/work community in southern France. The director somewhat off-handedly refers to medical research that the narrator’s own wife, a doctor, has been performing: “She’s running a new computer model,” the director says, “tracing the spread of nasal viruses across Eden-Olympia. She has a hunch that if people moved their chairs a further eighteen inches apart they’d stop the infectious vectors in their tracks.”
Perfectly calibrated down to the inch – or perhaps the millimeter – modern space itself becomes a kind of medical regime, its bare white rooms an antiviral treatment that we mistake for interior design.

Just as our city streets are wide enough to accommodate the turning radius of a specific class of passenger vehicle, our office cubicles, kindergarten playrooms, courts of law, and university lecture halls could be measured against the infectious vectors of specific pathogens.

In the geometry of objects around us are the outer infectious edges of diseases we no longer suffer from; we have literally designed them out of modern space, denying their ability to spread.

Courtesy of Geoff Manaugh

I’ve gotten into deconstruction lately.  Just today I found a whole blog devoted to analyzing published results in cognitive psychology. This is the intro to a paper deconstructing Kenneth Miller’s argument in Finding Darwin’s God:

I must confess that I am somewhat puzzled and amused when I hear some version of the question, “Can belief in the science of evolution and belief in religion coexist?”  This is not because of my opinion on the topic, but because the question seems to be overlooking something fundamentally obvious: science and religion, quite simply, do coexist.  They exist in the same world, the same nations, the same academies, and, as Brown University cell biologist Dr. Kenneth Miller’s case demonstrates, often in the same individuals.  But rather than simply dismissing the question as silly, I instead suspect that what is really being asked is a different question altogether.  That question is more like: “Can evolution and religion coexist in the same individual without some massive cognitive compartmentalization and dissonance?”  It’s the wordier question, to be sure, but also a more specific one that gets to the heart of what’s really being discussed.  Any informed observer knows that one person can reconcile these ideas: the bigger question is whether one can do so reasonably.

Courtesy of Jeremy Smyczek

In other news, NPR ran an article on how college graduates from my year are entering the worst job market “in modern memory”.  The story itself wasn’t anything new, but there was a very refreshing comment at the end:

Michael McNeal (mjmcneal) wrote:

Overlooked in this article is what the currently dismal job market bodes for student-loan repayment, which will likely become a problem for the nation in January of 2010, when the deferrment time provided to the two-thirds of all graduates who have student loans abruptly runs out.
The article did capture the naive optimism and sense of entitlement that is so pervasive among contemporary youth quite well, conveying the overly-sanguine attitude of those who haven’t experienced much of the world in comments like: “if you’re convinced you won’t get a job, you probably won’t”. How cute! Unfortunately, in the current economy it may very well be that you’re unlikely to get a job, regardless of whatever you are “convinced” about.

Wednesday, May 06, 2009 6:15:09 PM

Who is Logan Gage?

I was beginning to think that DI had given up on attacking neuroscience as they had not posted an anti-brain article since January.  I was wrong, however.  There is an article marked April 27 about free will.

But it’s not by Egnor.

It’s by a guy named Gage.

All that it says about him on the DI website is that he’s a policy analyst in D.C.  The post covers his opinions of a panel discussion on free will hosted by the American Enterprise Institute. I have a few problems with this:

  1. Gage is not trained in anything having to do with brains.
  2. Out of the five panelists, three were public policy analysts with no educational background in anything brain related
  3. The one panelist with neuroscience training is a shrink
  4. The last panelist is a misinformed schmuck science reporter for the NYTimes

So what we have here is a policy analyst critiquing a neuroscience forum populated by policy analysts.  To give you some sort of analogy, it would be akin to a group of economic analysts debating the existence of/ logic behind the Higgs boson.

httpv://www.youtube.com/watch?v=ewc1hixzYPY

All of this would be excusable, of course, if Gage had any hint of rational argument or evidence in his analysis.

 If Darwinism is true, there is no such thing as a human being, let alone human nature. There are just various organisms which right now happen to anatomically resemble each other and will one day in the not too distant future evolve new physical and intellectual features.

No.  Species designation is arbitrary in that there is no definitive way to say that two organisms are definitely two different species.  We used to define species as a group of individuals that can successfully interbreed, but there are organisms that are vastly different yet can still produce viable offspring, and other organisms that are nearly identical except that they cannot successfully breed (this happens a lot in insects).  But we do know that a H. sapiens is a H. sapiens and not a X. laevis.  And yes, there is such a thing as human nature.  Technically speaking, it is the statistical composite of human behavior over all individuals over time.

Or, in less complicated terms, an average.  As much as people talk about the difference between whatever groups of people they decide to arbitrarily define, the similarities are always always always orders of magnitude greater.  This is “human nature”.  It is a product of evolution, not a contradiction thereof.

You see, Darwinism destroys the classical view of essences. There is no underlying immaterial, unchangeable stable reality to the natural world. Rather, there is just a long spectrum of organisms, and what we call a ’species’ is really just an arbitrary snapshot in the history of life. All of this goes to the heart of many of the panelists’ concerns. Hoff Sommers, I believe, is very concerned with letting boys be boys and girls girls; several of the panelists are against over-medicating our children; Murray is terrified at the prospect that government and society might begin to manipulate our genomes. But what unifies these concerns and gives them legitimacy is the one idea they implicitly deny: That there is a stable reality called human nature.

Wait… what?  What does gender, medicine, or genetics have to do with essences?  The classical view of an essence is that some deity had a preconceived notion of “Dog”, and that all objects in the category “dog” on earth are various flawed replicas of this divine idea. Darwin destroyed this by showing that one, there is no preconceived notion because organisms adapt to their environments, and two, that what an organism is changes over time.  In other words, “dog” was not always “Dog”.  Why must you deny any of this in order be concerned about over-medicating children?

 But one wonders which part of Murray stood outside of his genes and environment to make this observation? His response assumes that there is a reality, “us,” which is more than the sum of “our” genes shaped by our environment. And this is exactly what materialist neuroscience denies.

There is one word for this.  That word is “NO”.

Because this is not a problem either.  This concept of the whole being more than the sum of the parts is called “emergent behavior”.  This lies entirely within materialism.  A good example of this is Benard convection.  If you heat a fluid unevenly, convection currents form.  There’s nothing from an individual molecule that would tell you it self-assembles into organized flow systems with other molecules.  You could only predict this by knowing how the particles interact, but it is entirely deterministic and entirely materialistic.

We do not need to give souls to water molecules to understand what happens to a pot of water when you boil it.

I love this research baby but I can’t think straight anymore

So I’ve been gone for a lot longer than I meant to.  I finished the thesis and defended it, I’ve taken my last class here, and now all that’s left is finals.  And graduation.  And finding a job.  And a new apartment.

As this blog is hosted by the Charles Center, I suppose I should give details about the thesis and whatnot.  It was horrible. Avoid it at all costs.

I’m just joking.  Sort of.  It was definitely not something I would want to do every week, but all in all wasn’t too bad.  The worst part was stretching it out.  I tend to err on the side of brevity, so writing a ten page introduction required monumentous effort. There was also an unbelievable amount of extraneous and utterly avoidable drama that occurred at the zero hour that I had to deal with, but we’ll not go into that here.

In other news, it’s been a rather disappointing couple of weeks on the science front.  It turns out that PZ is a misinformed anti-evpsycher (oddly enough, it seems that most biologists are… I’m not quite sure why):

It’s all deductively logical, but built on premises floating in thin air, with no empirical foundation at all…the usual flaw on which evolutionary psychology fails.

The premise is natural selection, so if you think that that evpsych is “floating on thin air” then you need to take another look at your own chosen profession.immune_evolution_michael_behe.jpg  Doesn’t this logically contradict all those posts you write defending the theory of evolution?  And you only think that there are no empirical foundations for evpsych because you do not read any of the empirical studies.  Remember that scene at the Dover trial where Behe stated under oath that there were no studies explaining how the immune system could have evolved?  And the the lawyer for the plaintiffs dropped a mountain of them on the witness stand?

Yeah.

Luckily, there was an excellent defense of evpsych by Jesse Bering in Scientific American this week [NSFW... unless you are in academia]:

Gallup’s approach to studying the design of the human penis is a perfect example of of  “reverse-engineering” as it’s used in the field of evolutionary psychology. This is a logico-deductive investigative technique for uncovering the adaptive purpose or function of existing (or “extant”) physical traits, psychological processes, or cognitive biases. That is to say, if you start with what you see today—in this case, the oddly shaped penis, with its bulbous glans (the “head” in common parlance), its long, rigid shaft, and the coronal ridge that forms a sort of umbrella-lip between these two parts—and work your way backward regarding how it came to look like that, the reverse-engineer is able to posit a set of function-based hypotheses derived from evolutionary theory. In the present case, we’re talking about penises, but the logic of reverse-engineering can be applied to just about anything organic, from the shape of our incisors, to the opposability of our thumbs, to the arch of our eyebrows. For the evolutionary psychologist, the pressing questions are, essentially, “why is it like that?” and “what is that for?” The answer isn’t always that it’s a biological adaptation—that it solved some evolutionary problem and therefore gave our ancestors a competitive edge in terms of their reproductive success. Sometimes a trait is just a “by-product” of other adaptations. Blood isn’t red, for example, because red worked better than green or yellow or blue, but only because it contains the red hemoglobin protein, which happens to be an excellent transporter of oxygen and carbon dioxide. But in the case of the human penis, it appears there’s a genuine adaptive reason that it looks the way it does.

Courtesy of Scientific American

But then I found out that Dan Ariely is a freud-o:

Even so, we all systematically underpredict the degree to which arousal completely negates our superego, and the way emotions can take control of our behavior

From “Predictably Irrational

See PZ?  This is why we need evpsych: to get rid of this notion that humans are rational creatures with “animal instincts”, that emotions are useless feelings that destroy our ability to think, that there is such a thing as a “superego” or an “id” or whatever you want to call it.  We need it to displace this tradition of brain investigation created by a cokehead mysoginist.

As a last thought, why am I the last person who has heard this song?

httpv://www.youtube.com/watch?v=M65zI9LH-as

No longer unrequited

Steven Novella loves me back:

The brain processes sensory information so that it is a useful, and not necessarily accurate, depiction of the world. This sensory input is also highly selective, giving us that slice of reality that proved to be most evolutionarily adaptive. That part of our brain that pays attention then attends to a tiny slice of that highly processed selective sensory information and mostly ignores the rest.

[emphasis mine]

Yeah, he probably didn’t get that from me, but a boy can dream.

Uncool things from uncool people

billboard.jpg

Courtesy of James Holden

So I’ve read through the leaked ICRC report on “extraordinary rendition” and “enhanced interrogation techniques”, or, to those of us who aren’t douchebag politicians, kidnapping and torture.  And I am disgusted.

It wasn’t just torture.

These sound like they were experiments.

Remember hearing about those Nazi doctors who would put people and vacuum chambers and stick things in prisoners’ eyes?  Well the US did the same thing with terror suspects and stress positions, simulated drowning (which isn’t “simulated” at all because the victim actually suffocates), induced hypothermia, starvation,  isolation, and confinement.  And it wasn’t just spooks either.  They were doctors.  They were psychologists.  I’ll paste the section of the report that deals with medical personnel behind the fold.

I want to see people hang for this

(Continued)

Cool things from cool people

Highlights from Discover’s interview of Robert Proctor:

Agnotology – (n) the study of the politics of ignorance

How common is the active creation of ignorance?
It’s pretty common. I mean, in terms of sowing doubt, certainly global warming is a famous one. You know, the global warming denialists who for years have managed to say, “Well, the case is not proven. We need more research.” And what’s interesting is that a lot of the people working on that were also the people working for Big Tobacco.

You have a unique take on the relationship between ideology and science.
Bad ideologies can produce good science, and good ideologies can produce bad science. In my book The Nazi War on Cancer, I showed that a horrific ideology can produce world-class science, and in my human origins work I showed that liberal antiracism can produce bad science.

One of the things I teach in my class is that the history of science is the history of confusion, and there are many, many confusions. In a lot of my work I look at how even crazy prejudices can sometimes create good science. For instance, we all think the Nazis were crazy, but in fact, you know, they did some amazing science—not just in spite of their ideology, but actually because of their ideology. And that’s the same with all strong ideologies. The Piltdown hoax [the 1912 discovery of a supposed skull of early man, which 40 years later was determined to be a human cranium and ape jaw fraudulently joined together] was actually perceived [as a hoax] fairly early on by creationists because they refused to believe that this could have been a real skull.

So I’ve already written about this stuff a bit (not the agnotology stuff – that’s news to me) in the context of the horrific Collins article.  I guess the point to be made yet again is that science has nothing to do with ideology.  Science is about finding truth, whether or not it fits into the particular way you want to view the world.

But then Proctor goes and bashes skepticism:

I’m not a skeptic; I’m a pragmatist. I think we have to live in the world and can’t be skeptical of everything. Trust is a fundamental part of being human.

Which is sort of ironic considering this guy spent his life fighting misinformation from Big Tobacco.  He then goes on to say that he believes in the common sense of most people, but then adds that most people are ignorant, which also seems awfully contradictory.

I suppose no one is perfect.

Dear Scicurious:

I am not looking back.

httpv://www.youtube.com/watch?v=apEZpYnN_1g

I would, however, like a group of cowboys to sing letters to people for me.

We elected you

NSFW

httpv://www.youtube.com/watch?v=z4a9vyf1_iE

From Tim Dickinson’s story on Ken Salazar, Obama’s secretary of the interior:

Salazar, for his part, is unapologetic. “I’m not here to please the environmental community,” he says. “From my point of view it was a science-based decision.”

In another disturbing move, Salazar placed an additional 1.2 million acres of Western land on the auction block, inviting oil and gas companies to bid on drilling leases. And in his opening address at Interior, he preached the virtues of far-fetched technologies like “clean coal” and “carbon capture and sequestration,” emphasizing that “oil and gas and coal resources are very much a part of the equation for our energy future.”

Courtesy of Rolling Stone

So I have a poster from the Obama campaign in my apartment that reads “I registered to vote because the future won’t run on oil”.

They were lying, apparently.

And just for the record, there is no such thing as “clean coal”.

httpv://www.youtube.com/watch?v=uFJVbdiMgfM

If you have the time, go and read Dickinson’s whole article on the various atrocities of the department of the interior, which has apparently not changed all that much since he-who-shall-not-be-named left office in January.

More bad science journalism

This time from the NYTimes.  These are currently the two most popular stories on their website:

An anti-evolution analysis of morality by David Brooks:

 The evolutionary approach also leads many scientists to neglect the concept of individual responsibility and makes it hard for them to appreciate that most people struggle toward goodness, not as a means, but as an end in itself.

Benedict Cary (the 8 glasses of water per day guy) thinks that we can selectively erase memories:

Suppose scientists could erase certain memories by tinkering with a single substance in the brain. Could make you forget a chronic fear, a traumatic loss, even a bad habit.

Researchers in Brooklyn have recently accomplished comparable feats, with a single dose of an experimental drug delivered to areas of the brain critical for holding specific types of memory, like emotional associations, spatial knowledge or motor skills.

So that’s what I’ve been doing wrong II

phd022509s.gif

Courtesy of Jorge Cham

I have been told twice today that it’s time to schedule my thesis defense.

Ugh.

I went to our old lab today.  All that’s left is the furniture, and it makes me kind of sad to think that my first real contribution to the world of empirical research occured in this lonely cinderblock box which will soon be demolished to make room for a new shinier building (funding pending). So I sat there on the couch for a bit drinking some coffee.  After about 15 minutes, someone came in asking if this was the right room for “that psych study”.

First off… there are quite a bit more than one psychology study going on in this university at the same time.  So that’s unhelpful in a most exemplary way (them W&M undergrads sure are overachievers).

Secondly… at the time he walked in, there was nothing in this room except four chairs, two tables, a couch, me, and my cup of coffee.  Do I really look like I’m doing anything important?

Thirdly… the psych deparment moved last week.  Not only are you at the wrong room, not only are you on the wrong floor, you have actually gone to the wrong building.

I was a little stunned at first.  I thought he might have been someone from our lab pulling a prank on me (there are ~25 people in the lab group at any given time, and I find it difficult to keep track of them all as I only see most of them twice a semester).  When I realized he was being serious, I stopped laughing, and looked around at the complete lack of anything science-y (the couch is not Freud-o certified) in the room.

Then I started laughing again.

And told him that he was in the wrong building.

httpv://www.youtube.com/watch?v=LIHCiTIyPiY&feature=related